Pedobacter aquicola sp nov., isolated from freshwater

  • Joung, Yochan; 
  • Jang, Hye-jin; 
  • Park, Miri; 
  • Song, Jaeho; 
  • Cho, Jang-Cheon
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초록

A non-motile, pink-pigmented bacterial strain designated IMCC25679(T), was isolated from freshwater Lake Chungju of Korea. Phylogenetic trees based on 16S rRNA gene sequences showed that the strain IMCC25679(T) formed a lineage within the genus Pedobacter. The strain IMCC25679(T) was closely related to Pedobacter daechungensis Dae 13(T) (96.4% sequence similarity), Pedobacter rivuli HME8457(T) (95.3%) and Pedobacter lentus DS-40(T) (94.3%). The major fatty acids of IMCC- 25679(T) were iso-C-15:0, iso-C-16:0 and summed feature 3 (comprising C-16:1 omega 6c and/or C-16:1 omega 7c). The major respiratory quinone was MK-7. The major polar lipids were phosphatidylethanolamine (PE), an unidentified sphingolipid (SL), an unidentified aminolipid (AL) and three unidentified polar lipids (PL). The DNA G + C content of IMCC25679(T) was 32.2 mol%. Based on the evidence presented in this study, the strain IMCC25679(T) represents a novel species within the genus Pedobacter, with the proposed name Pedobacter aquicola, sp. nov. The type strain is IMCC25679(T) (= KACC 19486(T) = NBRC113131(T)).

키워드

Pedobacter aquatica sp nov.; freshwater; 16S rRNA gene sequences; polyphasic analysis; MESOTROPHIC ARTIFICIAL LAKE; GENUS PEDOBACTER; EMENDED DESCRIPTION; RIBOSOMAL-RNA; FOREST SOIL; DAECHUNGENSIS; RHIZOSPHERE; HEPARINUS; SEDIMENT; TREES
제목
Pedobacter aquicola sp nov., isolated from freshwater
저자
Joung, Yochan; Jang, Hye-jin; Park, Miri; Song, Jaeho; Cho, Jang-Cheon
DOI
10.1007/s12275-018-7499-3
발행일
2018-07
유형
Article
저널명
Journal of Microbiology
권
56
호
7
페이지
478 ~ 484